Course Descriptions

BIO 101
Cellular and Molecular Biology I
Hücresel ve Moleküler Biyoloji I
Credits3 ECTS5
Preview of the cell and evolution theory; the chemistry of life; macromolecules; cells and organelles; membrane structure; transport across membrane; endomembrane system; bioenergetics; enzymes; chemical energy metabolism; aerobic respiration; photosynthesis; cytoskeletal systems.
Prerequisite: none
BIO 102
Cellular and Molecular Biology II
Hücresel ve Moleküler Biyoloji II
Credits3 ECTS5
Cellular movement and mobility; cell adhesion; extracellular matrix; electrical and chemical signal transduction; DNA, chromosomes, nucleus; cell cycle, DNA replication, mitosis; sexual reproduction, meiosis, recombination; Mendelian genetics; gene expression; recombinant DNA technology and its applications.
Prerequisite: none
BIO 106
Cell Biology Laboratory
Hücre Biyolojisi Laboratuvarı
Credits2 ECTS3
Scientific report writing; light microscopy, gram staining; preparation of buffers and solutions; spectrophotometric measurements; bacterial growth curve; sterile techniques; extraction of DNA; agarose gel electrophoresis; organelle fractionation and analysis of subcellular fractions; transfection of eukaryotic cells; subcellular localization of proteins using fluorescent tags; mitosis; cell cycle analysis.
Prerequisite: Corequisite: BIO 102
BIO 111
Prelude to Molecular Biology
Moleküler Biyolojiye Giriş
Credits1 ECTS1
Historical development of molecular biology; introduction to current topics in the field such as biotechnology, cloning, and gene therapy.
Prerequisite: none
BIO 121
Introduction to Cell Biology
Hücre Biyolojisine Giriş
Credits3 ECTS5
Biochemistry of the cell; cell structure and function; photosynthesis and respiration; cytokinesis; mitosis and meiosis; Mendelian genetics; genes and chromosomes; molecular basis of inheritance; recombinant DNA technology and genetic engineering.
Prerequisite: offered to: all Social Sciences and Engineering Departments
BIO 152
Introduction to Modern Biology
Modern Biyolojiye Giriş
Credits3 ECTS5
Origin and characteristics of life; biological macromolecules; eukaryotic and prokaryotic cell structure; membrane structure and function; cytokinesis; mitosis and meiosis; genes, chromosomes and heredity; homeostatic control mechanisms; nervous system; conscious brain and behavior; sensory system; endocrine system.
Prerequisite: offered to: Psychology and Psychological Counseling
BIO 201
Evolution and Biodiversity
Evrim ve Biyolojik Çeşitlilik
Credits3 ECTS3
Darwinian perspective of evolution, phylogeny, sources of genetic diversity, natural selection, genetic drift, gene flow, population genetics, species concept, history of life on earth, tree of life, animal, plant and microbial diversity, ecology.
Prerequisite: none
BIO 203
Biostatistics
Biyoistatistik
Credits3 ECTS5
Measurements; Data analysis and organization; Biological and Statistical variables; Samples and populations; Descriptive statistics: central tendency, dispersion, standard error, confidence limits; Graphical display of data; Concepts of probability; Probability distributions; Hypothesis testing and inference: exact binomial tests, Chi-square tests, goodness of fit tests, Fisher’s test, Student’s t-test, ANOVA, MANOVA, Kruskal-Wallis test, Rank tests; Regression; Correlation; Contingency tables; Power analysis
BIO 252
Genetics
Genetik
Credits3 ECTS6
Genes, genomes and genetic analysis; DNA structure and genetic variation; Mendelian genetics and its applications; chromosomes and sex-chromosome inheritance; genetic linkage; chromosome mapping, human karyotypes, chromosome behavior; extranuclear inheritance, molecular evolution, population genetics.
BIO 254
Genetics Laboratory
Genetik Laboratuvarı
Credits3 ECTS6
Use of restriction enzyme digestion in genetic linkage analysis; Drosophila as a model organism; monohybrid and dihybrid cross; polytene chromosome and karyotype analysis; polygenic inheritance and complex traits; fluorescence in situ hybridization, (FISH); bacterial conjugation and transduction; complementation; candidate gene approach.
Prerequisite: Corequisite: BIO 252
BIO 301
Biochemistry I
Biyokimya I
Credits4 ECTS6
Molecules of life; structure and function of proteins; nucleic acids; DNA as genetic material; flow of genetic information; enzymes; membrane structure and dynamics; membrane channels and pumps.
BIO 302
Biochemistry II
Biyokimya II
Credits4 ECTS6
Catabolism and generation of phosphate bond energy; glycolysis; TCA cycle; oxidative phosphorylation; oxidation of fatty acids and oxidative degradation of amino acids; photosynthesis; biosynthesis of carbohydrates, lipids, amino acids and nucleotides.
BIO 308
Seminar I
Seminer I
Credits1 ECTS2
Introduction to understanding and interpretation of research articles in the areas of molecular biology and genetics.
BIO 310
Cellular and Molecular Biology III
Hücresel ve Moleküler Biyoloji III
Credits4 ECTS6
Endomembrane system; vesicular transport and sorting; signal transduction (receptors, messengers); cytoskeletal systems and motility; development; stem cells and differentiation; immunology; cancer.
Prerequisite: BIO 102
BIO 322
Research Topics in Molecular Biology
Credits1 ECTS2
Presentations on the current research projects carried out in the Department.
BIO 331
Techniques in Biological Research
Biyolojide Araştırma Teknikleri
Credits3 ECTS6
Light and electron microscopy; spectrophotometric techniques (UV and visible absorption spectroscopy); chromatographic techniques; centrifugation; electrophoresis; enzyme assays; use of radioisotopes in biological research.
BIO 333
Biochemistry Laboratory
Biyokimya Laboratuvarı
Credits3 ECTS6
Determination of pK of amino acids, cell disruption techniques, centrifugation techniques, sucrose gradient centrifugation, dialysis, chromatography techniques, SDS- PAGE electrophoresis; spectrophotometric measurement of protein and nucleic acid concentration; determination of protein amounts by Bradford assay, Western Blotting; thinlayer chromatography; Michaelis Menten kinetics
Prerequisite: Corequisite: 301
BIO 342
Human Physiology
Insan Fizyolojisi
Credits3 ECTS6
Homeostatic control mechanisms; nerve cell physiology; central nervous system; peripheral nervous system; muscle physiology; cardiovascular physiology; blood and hematopoiesis; respiration and gas exchange; the kidneys; fluid and electrolyte balance; digestion and absorption of food; metabolism and energy balance; endocrine system; endocrine control of metabolism
BIO 353
Molecular Genetics
Moleküler Genetik
Credits4 ECTS5
Chemistry of the gene; DNA replication and recombination; transcription; translation; mutation; control of gene regulation; transposable elements; genetics of bacteria and phages; gene cloning and manipulation.
Prerequisite: BIO 102
BIO 355
Molecular Biology Laboratory
Moleküler Biyoloji Laboratuvarı
Credits3 ECTS4
How to use databases; primer design; construction of bacterial growth curves; competant bacterial cell preparation; plasmid DNA isolation; agarose gel electrophoresis; Polymerase Chain Reaction (PCR); purification of plasmid vector and PCR products, digestion with restriction enzymes, ligation, and transformation; screening with colony PCR; transfection of eukaryotic cells with the vector; microscopic visualization of fluorescently tagged proteins; quantitative Real Time PCR and DNA sequencing.
Prerequisite: Corequisite: BIO 353
BIO 403
Scientific Conduct
Bilimsel Yordam
Credits1 ECTS2
Responsible conduct of research (RCR): Collaborative Science, Conflicts of interests and commitment; data acquisition, management, sharing and ownership, ethical regulations in research involving human and animal subjects, mentoring; Peer review Publication practices and responsible authorship; research misconduct.
BIO 407
Seminar II
Seminer II
Credits2 ECTS3
Student presentation and discussions of research articles covering various areas of molecular biology and genetics such as development, cancer, genomics.
BIO 410
Cancer Biology
Kanser Biyolojisi
Credits3 ECTS6
Nature of cancer; oncogenes and tumor suppressor genes; signaling pathways in cancer; dysregulation of cell cycle and apoptosis; steps in tumorigenesis; treatment of cancer.
BIO 420
Immunology
İmmünoloji
Credits3 ECTS6
Basic concepts in immunology; principles of innate and adaptive immunity; the generation of lymphocyte antigen receptors; development of B and T lymphocytes; antigen presentation; survival and maturation of B and T lymphocytes in peripheral tissues; T cell-mediated immunity; the humoral immune response.
BIO 424
Enzyme Catalysis and Kinetics
Enzim Katalizi ve Kinetiği
Credits3 ECTS6
Principles of enzyme catalysis; transition state theory; basic equations of enzyme kinetics; steady-state and pre-steady state kinetics; irreversible and reversible enyme inhibition; enzymatic rate constants; rate determining processes; practical methods to determine kinetics and equilibriums; determination of intermediates in enzymatic reactions; usage of binding energy in catalysis; enzyme specificity and accuracy; editing or proofreading mechanisms; cost of accuracy in enzymatic reactions.
BIO 430
Neuroscience
Nörobilim
Credits3 ECTS6
Cellular and structural components of the nervous system; electrical signaling in nerve cells; action potential propagation; synaptic transmission; structure and function of ion channels; sensory systems; development of the nervous system; neuronal plasticity; learning and memory; consciousness and behavior; emotions; nervous system disorders.
BIO 440
Genome Biology
Genom Biyolojisi
Credits3 ECTS6
Mapping and sequencing of genomes; history and structure of genomic diversity; genomics of human diversity and disease; genomic technologies; introduction to systems biology.
BIO 450
Bioinformatics
Biyoinformatik
Credits3
Hidden Markov models; optimization algorithms; classification clustering algorithms and their application in identification of motives, expression, methylation, microRNA and TF regulation mechanisms
BIO 460
Developmental Biology
Gelişim Biyolojisi
Credits3 ECTS6
Patterns of development; life cycles of model organisms and experimental techniques; morphogenesis; germ cells and fertilization; cell differentiation and stem cells; organogenesis; development of the nervous system; growth and post-embryonic development; regeneration; evolution.
BIO 470
Genetic Disorders
Genetik Hastalıklar
Credits3 ECTS6
Genetic basis of inherited disorders; identification and characterization of novel genes; multifactorial disorders; molecular diagnosis; gene therapy.
BIO 475
Plant Molecular Biology ad Genetics
Bitki Moleküler Biyoloji ve Genetiği
Credits3 ECTS6
Structures of nuclear and cytoplasmic genomes; gene transfer techniques; gene expression and regulation in flowering plant development; transgenic plants and their use in biotechnology.
BIO 478
Applied Microbiology and Biotechnology
Uygulamalı Mikrobiyoloji ve Biyoteknoloji
Credits3 ECTS6
Diversity of microorganisms and their activities; interaction of microorganisms with their microbial environment; use of microorganisms in biotechnology.
BIO 491
Special Project I
Özel Proje I
Credits3 ECTS6
Designed for individual students to carry out laboratory research projects under the supervision of a faculty member. A final presentation of the work is required.
BIO 492
Special Project II
Özel Proje II
Credits3 ECTS6
Designed for individual students to carry out laboratory research projects under the supervision of a faculty member. A final presentation of the work is required.